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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17310843_17310989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17310843 - 17310989

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CTTCTTTGAATT

Flanking Amino Acid:

QTTEYIHRNQSLLQYRTSKS

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

77.6

0.62

0.8

75.2

34.9

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

58.6

0.35

1.4

73.39

38.1

Associated Gene:

Gene:

SPATA1

Ensembl Gene ID:

ENSAPLG00000016401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017117

17298374 - 17321490

23117

ENSAPLT00000040212

17302090 - 17321490

19401