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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17311135_17313709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17311135 - 17313709

Intron Length:

2575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACTGT

5'SS Class:

major

3'SS Sequence:

TATCCTGTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCATCATTATCC

Flanking Amino Acid:

PHQNRMKFQKELNTKLLVTN

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.2

43.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

74.4

0.55

0.9

68.2

37.2

Minor 5ss

43.9

-0.7

3.3

65.1

46.1

Minor BPS

57.1

0.2

1.9

68.52

42.7

Associated Gene:

Gene:

SPATA1

Ensembl Gene ID:

ENSAPLG00000016401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040212

17302090 - 17321490

19401

ENSAPLT00000017117

17298374 - 17321490

23117