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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17313959_17314065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17313959 - 17314065

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

AATTATTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTTCTCAAAT

Flanking Amino Acid:

ALKQTQFRVKDQNGSSGSLF

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

73.3

0.52

42.9

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

71.4

0.75

1.6

89.47

34.4

Associated Gene:

Gene:

SPATA1

Ensembl Gene ID:

ENSAPLG00000016401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017117

17298374 - 17321490

23117

ENSAPLT00000040212

17302090 - 17321490

19401