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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17314391_17314485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17314391 - 17314485

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATGTATT

5'SS Class:

major

3'SS Sequence:

CTGCATATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

GTCTGGTTAATA

Flanking Amino Acid:

LELKSFAPPYALYPELYLLP

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

85.6

30.5

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

69.7

0.44

0.9

66.5

39.1

Minor 5ss

50.8

0.03

2.5

73.1

36.3

Minor BPS

48.1

-0.1

2.4

63.35

43.6

Associated Gene:

Gene:

SPATA1

Ensembl Gene ID:

ENSAPLG00000016401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040212

17302090 - 17321490

19401

ENSAPLT00000017117

17298374 - 17321490

23117