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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17328888_17329751_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17328888 - 17329751

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

ACTGTCTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATCTATTACT

Flanking Amino Acid:

SSVRLRKEIKRKGKQPTEHV

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.65

0.9

69.5

41.1

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

0.21

1.9

75.04

41.4

Associated Gene:

Gene:

RPF1

Ensembl Gene ID:

ENSAPLG00000016382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017102

17327669 - 17333113

5445