Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_17352004_17353583_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17352004 - 17353583

Intron Length:

1580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGGTTCA

5'SS Class:

major

3'SS Sequence:

ATCTTGCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGTAT

U12 Branch Point Sequence:

CCTGCATGAACC

Flanking Amino Acid:

NRAVEQAWRSALHMRDLTA*

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

66.4

35.3

Major BPS

59.2

0.23

1.4

61.1

45.5

Major PPT

72.2

0.5

0.9

65.3

35.7

Minor 5ss

33.8

-1.8

37.8

42.2

Minor BPS

49.1

-0

1.9

60.1

44.8

Associated Gene:

Gene:

DNASE2B

Ensembl Gene ID:

ENSAPLG00000026479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045684

17351071 - 17362983

11913