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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17378432_17380409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17378432 - 17380409

Intron Length:

1978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AATTCTTTAATT

Flanking Amino Acid:

EEQASAFQEQEIDGKSLLLM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

75.1

41.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

81.3

0.7

0.9

77.7

36.1

Minor 5ss

37.2

-1.4

3.1

49.5

46.7

Minor BPS

81.1

1.05

87.51

31.3

Associated Gene:

Gene:

SAMD13

Ensembl Gene ID:

ENSAPLG00000016342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017051

17378288 - 17383135

4848