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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17380522_17382505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17380522 - 17382505

Intron Length:

1984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAGGTTAT

5'SS Class:

major

3'SS Sequence:

TTGTGCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAGAT

U12 Branch Point Sequence:

TATTTAGTGATT

Flanking Amino Acid:

TKCTSLLSDYVSVENGRPLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.2

67.9

39.9

Major BPS

71.4

0.53

39.8

Major PPT

82.9

0.74

0.9

77.1

37.1

Minor 5ss

42.5

-0.8

3.2

57.9

46.7

Minor BPS

47.4

-0.1

2.2

72.23

Associated Gene:

Gene:

SAMD13

Ensembl Gene ID:

ENSAPLG00000016342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017051

17378288 - 17383135

4848