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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17410066_17414210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17410066 - 17414210

Intron Length:

4145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGTA

5'SS Class:

major

3'SS Sequence:

TTTTCTCTACTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGAAAT

U12 Branch Point Sequence:

TTTTTCTCTACT

Flanking Amino Acid:

YAMKILDKQKVVKLKQIEHT

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

73.6

37.4

Major BPS

58.4

0.21

1.2

38.7

Major PPT

80.1

0.68

0.8

75.2

34.5

Minor 5ss

31.2

-2.1

3.3

40.7

45.6

Minor BPS

65.8

0.58

1.9

88.18

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035636

17400722 - 17426247

25526

ENSAPLT00000016948

17400722 - 17433052

32331