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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17563083_17620049_F

Intron Information:

Intron Rank:

141337

Intron Class:

major

Intron Phase:

Intron Coordinates:

17563083 - 17620049

Intron Length:

56967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCTTTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

40.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

100

1.12

0.4

100

Minor 5ss

-0.4

2.8

57.8

46.4

Minor BPS

70.3

0.72

1.1

81.54

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017939

17562600 - 17638058

75459