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Intron Name: Anas_platyrhynchos_platyrhynchos_8_18167836_18171297_F

Intron Information:

Intron Rank:

124534

Intron Class:

major

Intron Phase:

Intron Coordinates:

18167836 - 18171297

Intron Length:

3462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGCAC

U12 Branch Point Sequence:

AGCACCTGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

66.7

40.4

Major BPS

45.3

-0.2

1.4

51.4

43.9

Major PPT

91.7

0.94

0.6

87.6

22.6

Minor 5ss

28.3

-2.5

2.7

37.1

Minor BPS

54.9

0.24

1.6

68.13

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038038

18167710 - 18180738

13029