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Intron Name: Anas_platyrhynchos_platyrhynchos_8_18215159_18221348_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18215159 - 18221348

Intron Length:
6190

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGTCAC

5'SS Class:
major

3'SS Sequence:
TTTTCTGTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CAATAAC

U12 Branch Point Sequence:
CAGACAATAACC

Flanking Amino Acid:
DINSTSTLNQGHSLNNARDT

Intron Amino Acid Position:
1153

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.7
0.7
1.3
72.3
39.5

Major BPS
57.8
0.19
1.1
59.6
32.6

Major PPT
89.9
0.9
0.7
88.4
28.7

Minor 5ss
29.9
-2.3
2.7
35.6
41

Minor BPS
46.4
-0.3
1.9
54.82
42.4

Associated Gene:

Gene:
ADGRL2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18213694 - 18371429
157736

18214404 - 18389556
175153