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Intron Name: Anas_platyrhynchos_platyrhynchos_8_18240643_18242770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18240643 - 18242770

Intron Length:

2128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGGGTCTGCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTAACACTT

Flanking Amino Acid:

TRVSMPTENIVLDVAVLITE

Intron Amino Acid Position:

657

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

60.3

0.23

58.2

43.1

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

43.3

-0.4

2.1

69.91

41.2

Associated Gene:

Gene:

ADGRL2

Ensembl Gene ID:

ENSAPLG00000004072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023862

18214404 - 18371429

157026

ENSAPLT00000023178

18213694 - 18371429

157736

ENSAPLT00000021561

18213694 - 18371429

157736

ENSAPLT00000004278

18214404 - 18389556

175153

ENSAPLT00000038338

18213694 - 18371429

157736