Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_18242955_18246961_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18242955 - 18246961

Intron Length:

4007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACGTT

5'SS Class:

major

3'SS Sequence:

CTAATGAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

AGTTTCCTAATG

Flanking Amino Acid:

KDSAGRSYNKAIVDTVDNLL

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

69.7

41.2

Major BPS

76.8

0.67

40.9

Major PPT

62.7

0.29

1.1

55.5

43.4

Minor 5ss

40.6

-1.1

3.8

64.2

47.3

Minor BPS

57.3

0.09

1.7

Associated Gene:

Gene:

ADGRL2

Ensembl Gene ID:

ENSAPLG00000004072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038338

18213694 - 18371429

157736

ENSAPLT00000004278

18214404 - 18389556

175153