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Intron Name: Anas_platyrhynchos_platyrhynchos_8_18257919_18258877_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18257919 - 18258877

Intron Length:
959

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATAAC

5'SS Class:
strong_major

3'SS Sequence:
CTGTGACTGTTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACATAAT

U12 Branch Point Sequence:
TCTTCTTTTACT

Flanking Amino Acid:
ECVPYKVEQKVFVCPGTLKA

Intron Amino Acid Position:
138

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.9
0.89
0.9
83.8
27.2

Major BPS
66.4
0.41
1.1
66.3
36.5

Major PPT
60.7
0.24
1
59
42.1

Minor 5ss
35.4
-1.7
2.8
44.9
43.2

Minor BPS
74.3
0.85
1.5
87.77
37.8

Associated Gene:

Gene:
ADGRL2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18214404 - 18371429
157026