Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_18525200_18525311_F

Intron Information:

Intron Rank:

127667

Intron Class:

major

Intron Phase:

Intron Coordinates:

18525200 - 18525311

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTACACAGA

5'SS Class:

major

3'SS Sequence:

TTGTGTCTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

GATACATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.2

53.7

45.1

Major BPS

76.2

0.65

39.8

Major PPT

79.5

0.66

0.9

77.2

37.1

Minor 5ss

37.5

-1.4

3.2

48.1

47.8

Minor BPS

49.4

0.03

1.9

68.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045825

18524625 - 18526415

1791