Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_18682488_18683910_R

Intron Information:

Intron Rank:

152371

Intron Class:

major

Intron Phase:

Intron Coordinates:

18682488 - 18683910

Intron Length:

1423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTAACTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TGTCCTGTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.1

38.4

Major BPS

84.7

0.86

74.3

40.7

Major PPT

69.2

0.43

0.9

61.6

38.8

Minor 5ss

28.3

-2.5

2.8

33.2

41.9

Minor BPS

61.4

0.44

82.13

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026589

18682352 - 18685598

3247