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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1939001_1950402_R

Intron Information:

Intron Rank:

143564

Intron Class:

major

Intron Phase:

Intron Coordinates:

1939001 - 1950402

Intron Length:

11402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

ACTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TTAACCTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.9

39.9

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

83.7

0.76

0.8

80.8

36.2

Minor 5ss

39.6

-1.2

2.9

57.1

41.1

Minor BPS

82.8

1.03

1.1

85.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030658

1905755 - 1950685

44931