Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_19443216_19458983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19443216 - 19458983

Intron Length:

15768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TACCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CTTTTCTTACCT

Flanking Amino Acid:

FIGPACLIILVNLLAFGVII

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

81.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

71.3

0.48

0.8

62.2

34.4

Minor 5ss

41.9

-0.9

2.8

57.3

41.2

Minor BPS

72.5

0.78

1.6

86.99

39.2

Associated Gene:

Gene:

ADGRL4

Ensembl Gene ID:

ENSAPLG00000003585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003725

19296760 - 19461477

164718

ENSAPLT00000036545

19385603 - 19462856

77254

ENSAPLT00000031433

19402813 - 19461477

58665

ENSAPLT00000025953

19387225 - 19462856

75632

ENSAPLT00000048195

19293286 - 19461477

168192

ENSAPLT00000021835

19385603 - 19462856

77254

ENSAPLT00000046060

19293286 - 19461477

168192