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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19498588_19501089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19498588 - 19501089

Intron Length:

2502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

AAAACGTTAAAG

Flanking Amino Acid:

GIGPKLCLIRIHSIEAAEYN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

70.4

0.51

67.1

39.4

Major PPT

79.7

0.67

0.8

72.6

37.6

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

-0.4

2.2

50.5

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004163

19497847 - 19540474

42628