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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19501342_19503528_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19501342 - 19503528

Intron Length:

2187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TCTATTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AACTTCTAAAAT

Flanking Amino Acid:

KMQHSYSLQEAGIGGICNTT

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

78.1

0.63

72.7

42.2

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

53.1

0.18

1.8

68.25

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004163

19497847 - 19540474

42628