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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19509120_19510594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19509120 - 19510594

Intron Length:

1475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCAAA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TTGAACTCAACA

Flanking Amino Acid:

SSDSCSECLQLLHGFAGEAL

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.2

74.1

38.3

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

96.4

1.04

0.5

95.9

14.1

Minor 5ss

44.2

-0.6

2.7

57.2

47.1

Minor BPS

56.5

0.2

1.8

69.88

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004163

19497847 - 19540474

42628