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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19524221_19525893_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19524221 - 19525893

Intron Length:

1673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAACTGTA

5'SS Class:

major

3'SS Sequence:

CATTATATAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

TCCAGTTTAACT

Flanking Amino Acid:

SASGETDNIRDRQSVEDVSS

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

72.4

39.5

Major BPS

70.4

0.51

67.1

39.4

Major PPT

64.7

0.33

59.6

39.9

Minor 5ss

41.4

-1

3.2

49.3

Minor BPS

0.3

1.9

71.79

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004163

19497847 - 19540474

42628