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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19529644_19530650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19529644 - 19530650

Intron Length:

1007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTATCT

5'SS Class:

major

3'SS Sequence:

GGTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

AAATACTTAAGC

Flanking Amino Acid:

HNHDSSLTHERNFLGDVIPP

Intron Amino Acid Position:

1393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

37.9

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

80.6

0.69

0.9

76.9

42.1

Minor 5ss

39.3

-1.2

3.3

57.4

46.8

Minor BPS

56.3

0.18

1.8

64.33

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004163

19497847 - 19540474

42628