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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1961493_1962774_F

Intron Information:

Intron Rank:

138654

Intron Class:

major

Intron Phase:

Intron Coordinates:

1961493 - 1962774

Intron Length:

1282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTTATCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATGCTATAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

84.3

0.77

0.8

81.2

36.4

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

54.9

0.23

1.8

75.43

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035458

1961029 - 1963260

2232

ENSAPLT00000019737

1961262 - 1968858

7597