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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19621997_19622569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

19621997 - 19622569

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATTCGG

5'SS Class:

major

3'SS Sequence:

TTTAATATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

58.2

46.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.5

0.69

0.9

73.7

40.2

Minor 5ss

33.8

-1.8

2.9

38.7

41.3

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

PTGFR

Ensembl Gene ID:

ENSAPLG00000005684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005872

19605436 - 19622671

17236