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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19621997_19657264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

19621997 - 19657264

Intron Length:

35268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTTAATATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

81.7

31.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.5

0.69

0.9

73.7

40.2

Minor 5ss

38.8

-1.3

57.3

41.2

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

PTGFR

Ensembl Gene ID:

ENSAPLG00000005684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035213

19605436 - 19660444

55009

ENSAPLT00000030861

19605436 - 19697801

92366