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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19657345_19660359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

19657345 - 19660359

Intron Length:

3015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGCTA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

39.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.3

0.64

0.9

74.4

35.8

Minor 5ss

33.7

-1.9

3.5

48.3

Minor BPS

61.1

0.33

1.5

68.82

37.9

Associated Gene:

Gene:

PTGFR

Ensembl Gene ID:

ENSAPLG00000005684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035213

19605436 - 19660444

55009