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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19657345_19697428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

19657345 - 19697428

Intron Length:

40084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

81.9

26.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.3

0.64

0.9

74.4

35.8

Minor 5ss

36.6

-1.5

45.9

43.7

Minor BPS

61.1

0.33

1.5

68.82

37.9

Associated Gene:

Gene:

PTGFR

Ensembl Gene ID:

ENSAPLG00000005684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030861

19605436 - 19697801

92366