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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1968932_1971509_F

Intron Information:

Intron Rank:

138656

Intron Class:

major

Intron Phase:

Intron Coordinates:

1968932 - 1971509

Intron Length:

2578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGCGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTACTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

TCTACTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.6

38.4

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

80.9

0.7

0.8

75.4

32.9

Minor 5ss

25.5

-2.8

3.1

30.6

43.3

Minor BPS

60.7

0.33

1.8

71.49

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028727

1968541 - 1975288

6748