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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1974004_1975092_F

Intron Information:

Intron Rank:

138658

Intron Class:

major

Intron Phase:

Intron Coordinates:

1974004 - 1975092

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

CCTGCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

AATAAATAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.3

43.4

Major BPS

65.7

0.39

71.3

30.3

Major PPT

0.68

0.8

76.5

32.1

Minor 5ss

30.2

-2.3

3.3

31.3

42.9

Minor BPS

42.5

-0.4

60.58

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044055

1973851 - 1981806

7956

ENSAPLT00000028727

1968541 - 1975288

6748