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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19760197_19762744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19760197 - 19762744

Intron Length:

2548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CCTTGTTTAATT

Flanking Amino Acid:

RDIYDQFGEEGLKGGAGGPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

75.9

0.58

0.9

75.5

38.6

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

61.6

0.44

1.8

74.65

43.4

Associated Gene:

Gene:

DNAJB4

Ensembl Gene ID:

ENSAPLG00000005935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006142

19757063 - 19781186

24124