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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19763031_19780334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

19763031 - 19780334

Intron Length:

17304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTGTCTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.3

38.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

84.3

0.77

0.7

77.7

31.1

Minor 5ss

38.3

-1.3

3.5

56.7

47.5

Minor BPS

69.5

0.69

1.5

83.25

38.8

Associated Gene:

Gene:

DNAJB4

Ensembl Gene ID:

ENSAPLG00000005935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006142

19757063 - 19781186

24124