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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19784233_19784578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19784233 - 19784578

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TATTTATTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTAATTTTAAAA

Flanking Amino Acid:

DAKKVAPQNDSFGNQLPPMH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.7

0.74

0.8

77.6

35.4

Minor 5ss

40.3

-1.1

2.9

61.3

Minor BPS

62.4

0.38

1.4

69.88

35.9

Associated Gene:

Gene:

FUBP1

Ensembl Gene ID:

ENSAPLG00000005965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006272

19781207 - 19801135

19929