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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19790498_19791536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19790498 - 19791536

Intron Length:

1039

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TATTGCTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATATCATAAAT

Flanking Amino Acid:

TGKTGLIIGKGGETIKSISQ

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.1

68.5

38.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.2

0.66

0.8

73.2

Minor 5ss

28.1

-2.5

4.2

46.5

48.8

Minor BPS

49.7

0.06

1.8

68.08

42.1

Associated Gene:

Gene:

FUBP1

Ensembl Gene ID:

ENSAPLG00000005965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006272

19781207 - 19801135

19929