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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19796798_19801065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19796798 - 19801065

Intron Length:

4268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTGTG

5'SS Class:

major

3'SS Sequence:

TAAATACTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

AGCTATATAAAT

Flanking Amino Acid:

KAWEEYYKKNGSSSSCACWS

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

68.8

42.3

Major BPS

74.5

0.61

79.6

29.1

Major PPT

66.9

0.38

59.9

41.2

Minor 5ss

41.9

-0.9

3.1

47.2

Minor BPS

46.4

-0.1

1.8

62.57

40.9

Associated Gene:

Gene:

FUBP1

Ensembl Gene ID:

ENSAPLG00000005965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006272

19781207 - 19801135

19929