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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19812527_19816629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19812527 - 19816629

Intron Length:

4103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGGCAC

5'SS Class:

major

3'SS Sequence:

GAATTTCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

GTATCATTAATG

Flanking Amino Acid:

RAFAEARKNMVLDDESPEMF

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

58.4

40.5

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

68.4

0.41

62.7

42.6

Minor 5ss

37.3

-1.4

3.3

46.7

43.4

Minor BPS

0.3

1.7

66.65

40.7

Associated Gene:

Gene:

NEXN

Ensembl Gene ID:

ENSAPLG00000006591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006869

19807636 - 19823417

15782

ENSAPLT00000017952

19807636 - 19823417

15782