Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_19840158_19840516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19840158 - 19840516

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

TGATTTAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TCTGATTTAATA

Flanking Amino Acid:

NTEMELAARGVKNLNFYDVV

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

40.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

72.5

0.51

66.6

Minor 5ss

32.1

-2

3.3

36.6

41.6

Minor BPS

59.3

0.29

1.6

67.44

39.9

Associated Gene:

Gene:

MIGA1

Ensembl Gene ID:

ENSAPLG00000006900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025200

19837310 - 19875857

38548

ENSAPLT00000007183

19837310 - 19875857

38548