Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_19840826_19841169_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19840826 - 19841169

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGA

5'SS Class:

strong_major

3'SS Sequence:

AAACCTTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTTTTCTGAAAC

Flanking Amino Acid:

KLHCIRQAFQIILSETANRI

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.4

34.2

Major BPS

0.82

0.8

24.9

Major PPT

0.41

0.9

58.9

41.8

Minor 5ss

34.4

-1.8

2.8

42.8

Minor BPS

69.9

0.6

1.5

80.5

33.4

Associated Gene:

Gene:

MIGA1

Ensembl Gene ID:

ENSAPLG00000006900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025200

19837310 - 19875857

38548

ENSAPLT00000007183

19837310 - 19875857

38548