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Intron Name: Anas_platyrhynchos_platyrhynchos_8_19869955_19870628_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19869955 - 19870628

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATATTCTAATG

Flanking Amino Acid:

GDAIAEESVEDIISAEFIHK

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.8

23.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.7

0.83

0.7

81.4

29.8

Minor 5ss

35.6

-1.6

2.8

42.6

38.4

Minor BPS

47.5

-0.3

1.7

51.92

36.7

Associated Gene:

Gene:

MIGA1

Ensembl Gene ID:

ENSAPLG00000006900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025200

19837310 - 19875857

38548

ENSAPLT00000007183

19837310 - 19875857

38548