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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20075316_20075442_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20075316 - 20075442

Intron Length:
127

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAGCAA

5'SS Class:
major

3'SS Sequence:
TTCTGTGTGAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATAAT

U12 Branch Point Sequence:
TAATCCTGAATA

Flanking Amino Acid:
IITTGELAPQETTITEIKQR

Intron Amino Acid Position:
360

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.7
0.46
1.1
59.3
41.3

Major BPS
87.8
0.94
0.9
86.6
28.1

Major PPT
60.2
0.23
1.2
62.4
42.5

Minor 5ss
28.3
-2.5
3.5
38
46.9

Minor BPS
70.6
0.64
1.4
74.9
36

Associated Gene:

Gene:
AK5

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19990637 - 20085448
94812