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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20101013_20103297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20101013 - 20103297

Intron Length:

2285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTAAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

TTTTCCTTAAAA

Flanking Amino Acid:

SGHTNNWAVLVCTSRFWFNY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

65.2

0.34

1.1

68.5

35.4

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

1.19

1.1

93.09

25.3

Associated Gene:

Gene:

PIGK

Ensembl Gene ID:

ENSAPLG00000008332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048439

20099372 - 20172547

73176

ENSAPLT00000008715

20099372 - 20161333

61962