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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20108915_20109254_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20108915 - 20109254

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTAACT

5'SS Class:

major

3'SS Sequence:

CTATTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATATGAGTAAGA

Flanking Amino Acid:

DAFEQMWQKRRYNELLFIID

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

86.8

0.83

0.7

84.8

29.8

Minor 5ss

34.8

-1.7

3.3

50.3

45.7

Minor BPS

39.6

-0.7

2.6

55.53

43.2

Associated Gene:

Gene:

PIGK

Ensembl Gene ID:

ENSAPLG00000008332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048439

20099372 - 20172547

73176

ENSAPLT00000008715

20099372 - 20161333

61962