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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20183628_20190790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20183628 - 20190790

Intron Length:

7163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

CTTCCATCTATT

Flanking Amino Acid:

VYGMVPPDFCRDPNHLSVPY

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

0.37

1.3

76.1

Major PPT

81.8

0.72

0.7

76.4

25.8

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

45.5

-0.2

2.1

67.15

43.3

Associated Gene:

Gene:

ST6GALNAC5

Ensembl Gene ID:

ENSAPLG00000008770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009121

20183396 - 20255684

72289