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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20196280_20254814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20196280 - 20254814

Intron Length:

58535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

CTAATTTTGAGT

Flanking Amino Acid:

EGYISVLEHKPLKMHCKSCA

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

48.4

-0

1.6

63.23

41.6

Associated Gene:

Gene:

ST6GALNAC5

Ensembl Gene ID:

ENSAPLG00000008770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036200

20195373 - 20255684

60312

ENSAPLT00000009121

20183396 - 20255684

72289