Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_2022839_2029310_F

Intron Information:

Intron Rank:

142016

Intron Class:

major

Intron Phase:

Intron Coordinates:

2022839 - 2029310

Intron Length:

6472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGAG

5'SS Class:

major

3'SS Sequence:

GCTATTTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TGCTATTTTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.3

63.2

43.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

69.2

0.43

62.7

Minor 5ss

26.1

-2.8

3.1

43.1

Minor BPS

0.24

1.9

73.65

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030051

2022558 - 2029371

6814