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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20255046_20255618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20255046 - 20255618

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

CGGCGCTCAGCC

Flanking Amino Acid:

REAAKMKSLLRHGLAVCLAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

68.6

0.42

0.8

61.9

28.8

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

40.2

-0.7

44.79

43.1

Associated Gene:

Gene:

ST6GALNAC5

Ensembl Gene ID:

ENSAPLG00000008770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036200

20195373 - 20255684

60312

ENSAPLT00000009121

20183396 - 20255684

72289