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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20434047_20531289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20434047 - 20531289

Intron Length:

97243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATACTT

Flanking Amino Acid:

MACILKRKSVVAVSFI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

83.1

0.74

0.9

76.7

36.2

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

53.1

0.18

2.1

82.17

39.2

Associated Gene:

Gene:

ST6GALNAC3

Ensembl Gene ID:

ENSAPLG00000008973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033107

20316932 - 20532277

215346