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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20564137_20565117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20564137 - 20565117

Intron Length:

981

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAC

U12 Branch Point Sequence:

TGTTGTATAACA

Flanking Amino Acid:

AWAISIHKSQGMSLDCVEIS

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

81.3

32.8

Major BPS

60.2

0.25

1.3

39.8

Major PPT

71.1

0.48

69.1

Minor 5ss

31.8

-2.1

3.6

48.2

47.9

Minor BPS

55.6

0.17

72.93

38.9

Associated Gene:

Gene:

PIF1

Ensembl Gene ID:

ENSAPLG00000009068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009436

20562222 - 20570152

7931