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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20565921_20566677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20565921 - 20566677

Intron Length:

757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAA

U12 Branch Point Sequence:

CAAGGCTAAAAA

Flanking Amino Acid:

SKIALKVGAQVMLAKNLDVS

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

0.1

1.1

61.6

34.2

Major PPT

0.81

0.6

82.1

22.6

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

41.1

-0.6

2.1

46.13

43.1

Associated Gene:

Gene:

PIF1

Ensembl Gene ID:

ENSAPLG00000009068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009436

20562222 - 20570152

7931